Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.07■■□□□ 1.28
RFPL1O75677 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL1O75677 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL1O75677 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL1O75677 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RFPL1O75677 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.07■■□□□ 1.28
RFPL1O75677 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RFPL1O75677 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RFPL1O75677 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.07■■□□□ 1.28
RFPL1O75677 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL1O75677 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFPL1O75677 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
RFPL1O75677 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.06■■□□□ 1.28
RFPL1O75677 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFPL1O75677 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.05■■□□□ 1.28
RFPL1O75677 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFPL1O75677 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
RFPL1O75677 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFPL1O75677 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFPL1O75677 AC074183.2-201ENST00000623112 922 ntBASIC23.05■■□□□ 1.28
RFPL1O75677 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RFPL1O75677 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
RFPL1O75677 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.05■■□□□ 1.28
RFPL1O75677 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFPL1O75677 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RFPL1O75677 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFPL1O75677 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFPL1O75677 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 AC079834.2-201ENST00000609776 1949 ntBASIC23.04■■□□□ 1.28
RFPL1O75677 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.04■■□□□ 1.28
RFPL1O75677 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFPL1O75677 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
RFPL1O75677 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RFPL1O75677 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFPL1O75677 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RFPL1O75677 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFPL1O75677 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFPL1O75677 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.03■■□□□ 1.28
RFPL1O75677 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.03■■□□□ 1.28
RFPL1O75677 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFPL1O75677 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFPL1O75677 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFPL1O75677 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.02■■□□□ 1.28
RFPL1O75677 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFPL1O75677 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFPL1O75677 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
RFPL1O75677 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RFPL1O75677 AC139795.1-202ENST00000500444 432 ntBASIC23.02■■□□□ 1.28
RFPL1O75677 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.02■■□□□ 1.28
RFPL1O75677 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.02■■□□□ 1.28
RFPL1O75677 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RFPL1O75677 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.27
RFPL1O75677 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 AC010980.1-201ENST00000587192 1142 ntBASIC23.01■■□□□ 1.27
RFPL1O75677 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RFPL1O75677 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RFPL1O75677 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFPL1O75677 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFPL1O75677 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23■■□□□ 1.27
RFPL1O75677 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
RFPL1O75677 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RFPL1O75677 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFPL1O75677 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RFPL1O75677 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23■■□□□ 1.27
RFPL1O75677 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
RFPL1O75677 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23■■□□□ 1.27
RFPL1O75677 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23■■□□□ 1.27
RFPL1O75677 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23■■□□□ 1.27
RFPL1O75677 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFPL1O75677 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RFPL1O75677 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.99■■□□□ 1.27
RFPL1O75677 MIR6765-201ENST00000614092 87 ntBASIC22.99■■□□□ 1.27
RFPL1O75677 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.99■■□□□ 1.27
RFPL1O75677 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RFPL1O75677 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RFPL1O75677 KRT8P33-201ENST00000508125 1423 ntBASIC22.99■■□□□ 1.27
RFPL1O75677 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFPL1O75677 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RFPL1O75677 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms