Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SH2D1AO60880 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.15■□□□□ 0.34
SH2D1AO60880 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SH2D1AO60880 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D1AO60880 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D1AO60880 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D1AO60880 AC093536.1-201ENST00000569153 554 ntBASIC17.14■□□□□ 0.33
SH2D1AO60880 AC092296.2-201ENST00000589470 999 ntBASIC17.14■□□□□ 0.33
SH2D1AO60880 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.14■□□□□ 0.33
SH2D1AO60880 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SH2D1AO60880 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D1AO60880 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.14■□□□□ 0.33
SH2D1AO60880 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D1AO60880 ANOS2P-203ENST00000472227 1816 ntBASIC17.14■□□□□ 0.33
SH2D1AO60880 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SH2D1AO60880 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D1AO60880 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D1AO60880 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D1AO60880 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D1AO60880 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D1AO60880 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.13■□□□□ 0.33
SH2D1AO60880 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.13■□□□□ 0.33
SH2D1AO60880 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D1AO60880 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.13■□□□□ 0.33
SH2D1AO60880 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SH2D1AO60880 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SH2D1AO60880 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.13■□□□□ 0.33
SH2D1AO60880 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SH2D1AO60880 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
SH2D1AO60880 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SH2D1AO60880 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SH2D1AO60880 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.12■□□□□ 0.33
SH2D1AO60880 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SH2D1AO60880 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D1AO60880 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SH2D1AO60880 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D1AO60880 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.11■□□□□ 0.33
SH2D1AO60880 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D1AO60880 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D1AO60880 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D1AO60880 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SH2D1AO60880 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SH2D1AO60880 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 KRT18P10-201ENST00000388836 1287 ntBASIC17.1■□□□□ 0.33
SH2D1AO60880 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.1■□□□□ 0.33
SH2D1AO60880 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.1■□□□□ 0.33
SH2D1AO60880 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.1■□□□□ 0.33
SH2D1AO60880 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SH2D1AO60880 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SH2D1AO60880 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.09■□□□□ 0.33
SH2D1AO60880 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 ECEL1P2-201ENST00000461596 1295 ntBASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SH2D1AO60880 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.09■□□□□ 0.33
SH2D1AO60880 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SH2D1AO60880 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SH2D1AO60880 EP400NL-214ENST00000641289 2402 ntBASIC17.09■□□□□ 0.33
SH2D1AO60880 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SH2D1AO60880 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SH2D1AO60880 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SH2D1AO60880 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms