Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CTNND1O60716 SYT6-210ENST00000641643 1587 ntBASIC27.09■■□□□ 1.93
CTNND1O60716 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CTNND1O60716 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.09■■□□□ 1.93
CTNND1O60716 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CTNND1O60716 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
CTNND1O60716 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
CTNND1O60716 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
CTNND1O60716 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.08■■□□□ 1.93
CTNND1O60716 MIR939-201ENST00000401314 82 ntBASIC27.08■■□□□ 1.93
CTNND1O60716 AF213884.3-201ENST00000563833 479 ntBASIC27.08■■□□□ 1.93
CTNND1O60716 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
CTNND1O60716 MIR6089-201ENST00000616698 64 ntBASIC27.08■■□□□ 1.93
CTNND1O60716 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC27.08■■□□□ 1.93
CTNND1O60716 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.08■■□□□ 1.93
CTNND1O60716 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CTNND1O60716 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.08■■□□□ 1.93
CTNND1O60716 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.07■■□□□ 1.92
CTNND1O60716 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
CTNND1O60716 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CTNND1O60716 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CTNND1O60716 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CTNND1O60716 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CTNND1O60716 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.06■■□□□ 1.92
CTNND1O60716 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CTNND1O60716 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
CTNND1O60716 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
CTNND1O60716 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CTNND1O60716 AC105265.2-201ENST00000467189 838 ntBASIC27.06■■□□□ 1.92
CTNND1O60716 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CTNND1O60716 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CTNND1O60716 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
CTNND1O60716 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CTNND1O60716 AP001330.3-201ENST00000520123 633 ntBASIC27.05■■□□□ 1.92
CTNND1O60716 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
CTNND1O60716 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.05■■□□□ 1.92
CTNND1O60716 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.05■■□□□ 1.92
CTNND1O60716 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC27.05■■□□□ 1.92
CTNND1O60716 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC27.05■■□□□ 1.92
CTNND1O60716 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.05■■□□□ 1.92
CTNND1O60716 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CTNND1O60716 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CTNND1O60716 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CTNND1O60716 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CTNND1O60716 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
CTNND1O60716 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CTNND1O60716 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.04■■□□□ 1.92
CTNND1O60716 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC27.04■■□□□ 1.92
CTNND1O60716 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CTNND1O60716 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.03■■□□□ 1.92
CTNND1O60716 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CTNND1O60716 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTNND1O60716 AL022069.1-201ENST00000568025 1636 ntBASIC27.02■■□□□ 1.92
CTNND1O60716 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC27.02■■□□□ 1.92
CTNND1O60716 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTNND1O60716 SERBP1P1-201ENST00000396021 1160 ntBASIC27.02■■□□□ 1.92
CTNND1O60716 MIR4767-201ENST00000582827 78 ntBASIC27.02■■□□□ 1.92
CTNND1O60716 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CTNND1O60716 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.01■■□□□ 1.92
CTNND1O60716 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CTNND1O60716 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CTNND1O60716 AC091305.1-201ENST00000479476 895 ntBASIC27.01■■□□□ 1.91
CTNND1O60716 AC099791.2-201ENST00000605725 427 ntBASIC27.01■■□□□ 1.91
CTNND1O60716 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CTNND1O60716 DUSP8P4-201ENST00000399538 1761 ntBASIC27.01■■□□□ 1.91
CTNND1O60716 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CTNND1O60716 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC27■■□□□ 1.91
CTNND1O60716 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27■■□□□ 1.91
CTNND1O60716 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CTNND1O60716 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC27■■□□□ 1.91
CTNND1O60716 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27■■□□□ 1.91
CTNND1O60716 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC27■■□□□ 1.91
CTNND1O60716 AC009102.2-201ENST00000606772 1639 ntBASIC27■■□□□ 1.91
CTNND1O60716 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27■■□□□ 1.91
CTNND1O60716 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
CTNND1O60716 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CTNND1O60716 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.99■■□□□ 1.91
CTNND1O60716 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CTNND1O60716 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.99■■□□□ 1.91
CTNND1O60716 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.98■■□□□ 1.91
CTNND1O60716 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTNND1O60716 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CTNND1O60716 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CTNND1O60716 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.98■■□□□ 1.91
CTNND1O60716 AL138724.1-201ENST00000606771 1088 ntBASIC26.98■■□□□ 1.91
CTNND1O60716 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTNND1O60716 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.98■■□□□ 1.91
CTNND1O60716 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
CTNND1O60716 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CTNND1O60716 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.97■■□□□ 1.91
CTNND1O60716 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.97■■□□□ 1.91
CTNND1O60716 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.97■■□□□ 1.91
CTNND1O60716 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.96■■□□□ 1.91
CTNND1O60716 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CTNND1O60716 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CTNND1O60716 MIR5787-201ENST00000611784 55 ntBASIC26.96■■□□□ 1.91
CTNND1O60716 AC092666.2-201ENST00000613287 246 ntBASIC26.96■■□□□ 1.91
CTNND1O60716 AC011298.3-201ENST00000615796 283 ntBASIC26.96■■□□□ 1.91
CTNND1O60716 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.96■■□□□ 1.91
CTNND1O60716 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms