Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TSPAN3O60637 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.76■■□□□ 1.39
TSPAN3O60637 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.76■■□□□ 1.39
TSPAN3O60637 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN3O60637 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.76■■□□□ 1.39
TSPAN3O60637 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.76■■□□□ 1.39
TSPAN3O60637 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.76■■□□□ 1.39
TSPAN3O60637 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.76■■□□□ 1.39
TSPAN3O60637 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.76■■□□□ 1.39
TSPAN3O60637 MIR3621-201ENST00000580529 85 ntBASIC23.76■■□□□ 1.39
TSPAN3O60637 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.76■■□□□ 1.39
TSPAN3O60637 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.76■■□□□ 1.39
TSPAN3O60637 AC135731.1-201ENST00000569415 2548 ntBASIC23.76■■□□□ 1.39
TSPAN3O60637 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TSPAN3O60637 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.76■■□□□ 1.39
TSPAN3O60637 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TSPAN3O60637 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN3O60637 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TSPAN3O60637 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.75■■□□□ 1.39
TSPAN3O60637 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.75■■□□□ 1.39
TSPAN3O60637 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TSPAN3O60637 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.75■■□□□ 1.39
TSPAN3O60637 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN3O60637 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN3O60637 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN3O60637 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN3O60637 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN3O60637 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.74■■□□□ 1.39
TSPAN3O60637 AC019069.1-201ENST00000610008 1333 ntBASIC23.74■■□□□ 1.39
TSPAN3O60637 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN3O60637 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TSPAN3O60637 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN3O60637 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN3O60637 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN3O60637 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN3O60637 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
TSPAN3O60637 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.73■■□□□ 1.39
TSPAN3O60637 AC131281.2-201ENST00000520478 145 ntBASIC23.73■■□□□ 1.39
TSPAN3O60637 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.73■■□□□ 1.39
TSPAN3O60637 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.73■■□□□ 1.39
TSPAN3O60637 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN3O60637 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
TSPAN3O60637 AL022069.1-201ENST00000568025 1636 ntBASIC23.73■■□□□ 1.39
TSPAN3O60637 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.73■■□□□ 1.39
TSPAN3O60637 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN3O60637 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TSPAN3O60637 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN3O60637 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN3O60637 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.72■■□□□ 1.39
TSPAN3O60637 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.72■■□□□ 1.39
TSPAN3O60637 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.72■■□□□ 1.39
TSPAN3O60637 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TSPAN3O60637 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TSPAN3O60637 AC142381.3-201ENST00000568208 1670 ntBASIC23.72■■□□□ 1.39
TSPAN3O60637 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
TSPAN3O60637 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN3O60637 AP003733.4-201ENST00000623785 1697 ntBASIC23.71■■□□□ 1.39
TSPAN3O60637 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN3O60637 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN3O60637 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN3O60637 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TSPAN3O60637 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TSPAN3O60637 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TSPAN3O60637 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TSPAN3O60637 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
TSPAN3O60637 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.69■■□□□ 1.38
TSPAN3O60637 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.69■■□□□ 1.38
TSPAN3O60637 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
TSPAN3O60637 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.69■■□□□ 1.38
TSPAN3O60637 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TSPAN3O60637 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
TSPAN3O60637 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN3O60637 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN3O60637 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.68■■□□□ 1.38
TSPAN3O60637 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN3O60637 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.68■■□□□ 1.38
TSPAN3O60637 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN3O60637 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN3O60637 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.68■■□□□ 1.38
TSPAN3O60637 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TSPAN3O60637 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TSPAN3O60637 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TSPAN3O60637 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.67■■□□□ 1.38
TSPAN3O60637 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.67■■□□□ 1.38
TSPAN3O60637 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TSPAN3O60637 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TSPAN3O60637 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.67■■□□□ 1.38
TSPAN3O60637 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.67■■□□□ 1.38
TSPAN3O60637 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TSPAN3O60637 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TSPAN3O60637 MIR4466-201ENST00000606121 54 ntBASIC23.67■■□□□ 1.38
TSPAN3O60637 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TSPAN3O60637 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms