Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.48■■□□□ 1.83
ATP2A1O14983 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.48■■□□□ 1.83
ATP2A1O14983 AL031432.3-201ENST00000607698 485 ntBASIC26.48■■□□□ 1.83
ATP2A1O14983 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
ATP2A1O14983 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ATP2A1O14983 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.47■■□□□ 1.83
ATP2A1O14983 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.47■■□□□ 1.83
ATP2A1O14983 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.47■■□□□ 1.83
ATP2A1O14983 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
ATP2A1O14983 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATP2A1O14983 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ATP2A1O14983 AL022069.1-201ENST00000568025 1636 ntBASIC26.47■■□□□ 1.83
ATP2A1O14983 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
ATP2A1O14983 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.46■■□□□ 1.83
ATP2A1O14983 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ATP2A1O14983 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ATP2A1O14983 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.46■■□□□ 1.83
ATP2A1O14983 AL136162.1-201ENST00000607711 1078 ntBASIC26.46■■□□□ 1.83
ATP2A1O14983 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.46■■□□□ 1.83
ATP2A1O14983 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATP2A1O14983 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
ATP2A1O14983 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
ATP2A1O14983 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
ATP2A1O14983 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
ATP2A1O14983 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
ATP2A1O14983 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.45■■□□□ 1.82
ATP2A1O14983 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
ATP2A1O14983 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
ATP2A1O14983 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.45■■□□□ 1.82
ATP2A1O14983 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATP2A1O14983 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATP2A1O14983 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.44■■□□□ 1.82
ATP2A1O14983 AC135279.3-201ENST00000610945 1311 ntBASIC26.44■■□□□ 1.82
ATP2A1O14983 SUDS3P1-201ENST00000505831 966 ntBASIC26.44■■□□□ 1.82
ATP2A1O14983 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.44■■□□□ 1.82
ATP2A1O14983 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.44■■□□□ 1.82
ATP2A1O14983 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATP2A1O14983 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP2A1O14983 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP2A1O14983 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
ATP2A1O14983 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP2A1O14983 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.43■■□□□ 1.82
ATP2A1O14983 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
ATP2A1O14983 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.43■■□□□ 1.82
ATP2A1O14983 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
ATP2A1O14983 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.43■■□□□ 1.82
ATP2A1O14983 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ATP2A1O14983 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ATP2A1O14983 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ATP2A1O14983 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.42■■□□□ 1.82
ATP2A1O14983 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ATP2A1O14983 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC26.42■■□□□ 1.82
ATP2A1O14983 DUX4L19-201ENST00000557448 1267 ntBASIC26.42■■□□□ 1.82
ATP2A1O14983 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
ATP2A1O14983 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
ATP2A1O14983 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ATP2A1O14983 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ATP2A1O14983 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
ATP2A1O14983 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.41■■□□□ 1.82
ATP2A1O14983 EDA-201ENST00000338901 1233 ntBASIC26.41■■□□□ 1.82
ATP2A1O14983 AC024257.2-201ENST00000549699 147 ntBASIC26.41■■□□□ 1.82
ATP2A1O14983 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.41■■□□□ 1.82
ATP2A1O14983 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.41■■□□□ 1.82
ATP2A1O14983 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ATP2A1O14983 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
ATP2A1O14983 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.4■■□□□ 1.82
ATP2A1O14983 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ATP2A1O14983 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.4■■□□□ 1.82
ATP2A1O14983 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.4■■□□□ 1.82
ATP2A1O14983 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ATP2A1O14983 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ATP2A1O14983 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ATP2A1O14983 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ATP2A1O14983 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ATP2A1O14983 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.39■■□□□ 1.82
ATP2A1O14983 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
ATP2A1O14983 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.39■■□□□ 1.82
ATP2A1O14983 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.38■■□□□ 1.81
ATP2A1O14983 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATP2A1O14983 AC142381.2-201ENST00000566120 298 ntBASIC26.38■■□□□ 1.81
ATP2A1O14983 AC092171.4-201ENST00000609130 632 ntBASIC26.38■■□□□ 1.81
ATP2A1O14983 AL161729.1-201ENST00000604104 1402 ntBASIC26.38■■□□□ 1.81
ATP2A1O14983 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.37■■□□□ 1.81
ATP2A1O14983 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ATP2A1O14983 AL355001.2-201ENST00000620617 1191 ntBASIC26.37■■□□□ 1.81
ATP2A1O14983 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.37■■□□□ 1.81
ATP2A1O14983 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP2A1O14983 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP2A1O14983 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATP2A1O14983 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.37■■□□□ 1.81
ATP2A1O14983 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP2A1O14983 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
ATP2A1O14983 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP2A1O14983 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ATP2A1O14983 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP2A1O14983 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.36■■□□□ 1.81
ATP2A1O14983 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
ATP2A1O14983 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP2A1O14983 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.35■■□□□ 1.81
ATP2A1O14983 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms