Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CLIC1O00299 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CLIC1O00299 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC1O00299 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CLIC1O00299 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC1O00299 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.66■■□□□ 1.06
CLIC1O00299 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC1O00299 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC1O00299 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CLIC1O00299 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CLIC1O00299 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.66■■□□□ 1.06
CLIC1O00299 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CLIC1O00299 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.65■■□□□ 1.06
CLIC1O00299 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.65■■□□□ 1.06
CLIC1O00299 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 MIR6765-201ENST00000614092 87 ntBASIC21.65■■□□□ 1.06
CLIC1O00299 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CLIC1O00299 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLIC1O00299 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CLIC1O00299 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.64■■□□□ 1.06
CLIC1O00299 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.64■■□□□ 1.06
CLIC1O00299 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLIC1O00299 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.64■■□□□ 1.05
CLIC1O00299 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC1O00299 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC1O00299 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC1O00299 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLIC1O00299 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.63■■□□□ 1.05
CLIC1O00299 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.63■■□□□ 1.05
CLIC1O00299 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.63■■□□□ 1.05
CLIC1O00299 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CLIC1O00299 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CLIC1O00299 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 AL161729.1-201ENST00000604104 1402 ntBASIC21.63■■□□□ 1.05
CLIC1O00299 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
CLIC1O00299 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.63■■□□□ 1.05
CLIC1O00299 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLIC1O00299 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
CLIC1O00299 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLIC1O00299 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC1O00299 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC1O00299 DUX4L9-201ENST00000449051 1259 ntBASIC21.62■■□□□ 1.05
CLIC1O00299 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC1O00299 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.62■■□□□ 1.05
CLIC1O00299 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC1O00299 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.61■■□□□ 1.05
CLIC1O00299 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC1O00299 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.61■■□□□ 1.05
CLIC1O00299 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC1O00299 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CLIC1O00299 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
CLIC1O00299 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC1O00299 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
CLIC1O00299 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLIC1O00299 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
CLIC1O00299 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.61■■□□□ 1.05
CLIC1O00299 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.6■■□□□ 1.05
CLIC1O00299 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC1O00299 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC1O00299 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CLIC1O00299 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.6■■□□□ 1.05
CLIC1O00299 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC1O00299 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC1O00299 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.59■■□□□ 1.05
CLIC1O00299 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CLIC1O00299 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CLIC1O00299 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.59■■□□□ 1.05
CLIC1O00299 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.59■■□□□ 1.05
CLIC1O00299 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC1O00299 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC1O00299 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC1O00299 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.58■■□□□ 1.05
CLIC1O00299 ANOS2P-203ENST00000472227 1816 ntBASIC21.58■■□□□ 1.05
CLIC1O00299 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.58■■□□□ 1.05
CLIC1O00299 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC1O00299 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLIC1O00299 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms