Protein–RNA interactions for Protein: D6R901

USP17L21, Ubiquitin carboxyl-terminal hydrolase 17-like protein 21, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L21D6R901 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.4■■□□□ 1.98
USP17L21D6R901 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP17L21D6R901 AL022069.1-201ENST00000568025 1636 ntBASIC27.39■■□□□ 1.98
USP17L21D6R901 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP17L21D6R901 AC131281.2-201ENST00000520478 145 ntBASIC27.39■■□□□ 1.98
USP17L21D6R901 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
USP17L21D6R901 AC135731.1-201ENST00000569415 2548 ntBASIC27.39■■□□□ 1.97
USP17L21D6R901 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
USP17L21D6R901 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L21D6R901 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L21D6R901 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
USP17L21D6R901 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.38■■□□□ 1.97
USP17L21D6R901 STK32C-205ENST00000456004 607 ntTSL 2 BASIC27.38■■□□□ 1.97
USP17L21D6R901 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
USP17L21D6R901 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.38■■□□□ 1.97
USP17L21D6R901 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L21D6R901 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L21D6R901 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.37■■□□□ 1.97
USP17L21D6R901 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
USP17L21D6R901 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
USP17L21D6R901 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L21D6R901 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L21D6R901 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L21D6R901 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.36■■□□□ 1.97
USP17L21D6R901 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L21D6R901 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
USP17L21D6R901 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
USP17L21D6R901 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
USP17L21D6R901 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC27.36■■□□□ 1.97
USP17L21D6R901 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L21D6R901 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L21D6R901 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.35■■□□□ 1.97
USP17L21D6R901 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.35■■□□□ 1.97
USP17L21D6R901 PEMT-206ENST00000435340 960 ntTSL 5 BASIC27.35■■□□□ 1.97
USP17L21D6R901 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.35■■□□□ 1.97
USP17L21D6R901 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.35■■□□□ 1.97
USP17L21D6R901 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
USP17L21D6R901 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC27.35■■□□□ 1.97
USP17L21D6R901 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
USP17L21D6R901 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27.34■■□□□ 1.97
USP17L21D6R901 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
USP17L21D6R901 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L21D6R901 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L21D6R901 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.34■■□□□ 1.97
USP17L21D6R901 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L21D6R901 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
USP17L21D6R901 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L21D6R901 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
USP17L21D6R901 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L21D6R901 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
USP17L21D6R901 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L21D6R901 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L21D6R901 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.33■■□□□ 1.97
USP17L21D6R901 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
USP17L21D6R901 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC27.33■■□□□ 1.97
USP17L21D6R901 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L21D6R901 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L21D6R901 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L21D6R901 MIR4466-201ENST00000606121 54 ntBASIC27.32■■□□□ 1.96
USP17L21D6R901 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L21D6R901 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L21D6R901 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L21D6R901 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
USP17L21D6R901 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
USP17L21D6R901 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
USP17L21D6R901 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.31■■□□□ 1.96
USP17L21D6R901 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L21D6R901 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L21D6R901 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L21D6R901 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC27.31■■□□□ 1.96
USP17L21D6R901 AL512631.2-201ENST00000604634 923 ntBASIC27.31■■□□□ 1.96
USP17L21D6R901 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L21D6R901 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.31■■□□□ 1.96
USP17L21D6R901 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.31■■□□□ 1.96
USP17L21D6R901 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP17L21D6R901 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L21D6R901 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP17L21D6R901 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.3■■□□□ 1.96
USP17L21D6R901 CD37-213ENST00000598095 1598 ntTSL 2 BASIC27.3■■□□□ 1.96
USP17L21D6R901 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.3■■□□□ 1.96
USP17L21D6R901 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC27.3■■□□□ 1.96
USP17L21D6R901 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L21D6R901 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L21D6R901 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L21D6R901 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L21D6R901 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.29■■□□□ 1.96
USP17L21D6R901 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC27.29■■□□□ 1.96
USP17L21D6R901 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.29■■□□□ 1.96
USP17L21D6R901 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
USP17L21D6R901 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP17L21D6R901 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC27.28■■□□□ 1.96
USP17L21D6R901 AC005703.6-201ENST00000623265 1329 ntBASIC27.28■■□□□ 1.96
USP17L21D6R901 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC27.28■■□□□ 1.96
USP17L21D6R901 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP17L21D6R901 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP17L21D6R901 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.28■■□□□ 1.96
USP17L21D6R901 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP17L21D6R901 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.27■■□□□ 1.96
USP17L21D6R901 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
USP17L21D6R901 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms