Protein–RNA interactions for Protein: A8MYP8

ODF3B, Outer dense fiber protein 3B, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3BA8MYP8 AC141586.4-201ENST00000624558 1573 ntBASIC18.68■□□□□ 0.58
ODF3BA8MYP8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ODF3BA8MYP8 AC135731.1-201ENST00000569415 2548 ntBASIC18.67■□□□□ 0.58
ODF3BA8MYP8 KRT16P3-201ENST00000439127 1283 ntBASIC18.67■□□□□ 0.58
ODF3BA8MYP8 AL356441.2-201ENST00000443009 864 ntBASIC18.67■□□□□ 0.58
ODF3BA8MYP8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ODF3BA8MYP8 AC010997.5-201ENST00000609182 354 ntBASIC18.67■□□□□ 0.58
ODF3BA8MYP8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ODF3BA8MYP8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ODF3BA8MYP8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ODF3BA8MYP8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
ODF3BA8MYP8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.65■□□□□ 0.58
ODF3BA8MYP8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ODF3BA8MYP8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.65■□□□□ 0.58
ODF3BA8MYP8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.65■□□□□ 0.58
ODF3BA8MYP8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ODF3BA8MYP8 LINC00543-201ENST00000567234 1845 ntBASIC18.65■□□□□ 0.58
ODF3BA8MYP8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ODF3BA8MYP8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.64■□□□□ 0.57
ODF3BA8MYP8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 LINC01124-201ENST00000409786 2117 ntBASIC18.64■□□□□ 0.57
ODF3BA8MYP8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ODF3BA8MYP8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ODF3BA8MYP8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ODF3BA8MYP8 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.62■□□□□ 0.57
ODF3BA8MYP8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.62■□□□□ 0.57
ODF3BA8MYP8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.62■□□□□ 0.57
ODF3BA8MYP8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.62■□□□□ 0.57
ODF3BA8MYP8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ODF3BA8MYP8 MIR6724-1-201ENST00000616420 92 ntBASIC18.61■□□□□ 0.57
ODF3BA8MYP8 MIR6724-2-201ENST00000616483 92 ntBASIC18.61■□□□□ 0.57
ODF3BA8MYP8 MIR6724-4-201ENST00000617390 92 ntBASIC18.61■□□□□ 0.57
ODF3BA8MYP8 MIR6724-3-201ENST00000622482 92 ntBASIC18.61■□□□□ 0.57
ODF3BA8MYP8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ODF3BA8MYP8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ODF3BA8MYP8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.6■□□□□ 0.57
ODF3BA8MYP8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ODF3BA8MYP8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.6■□□□□ 0.57
ODF3BA8MYP8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.6■□□□□ 0.57
ODF3BA8MYP8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ODF3BA8MYP8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
ODF3BA8MYP8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.59■□□□□ 0.57
ODF3BA8MYP8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.59■□□□□ 0.57
ODF3BA8MYP8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ODF3BA8MYP8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ODF3BA8MYP8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
ODF3BA8MYP8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ODF3BA8MYP8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms