Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.62■■■□□ 2.65
SBNO1A3KN83 REST-207ENST00000616975 1370 ntTSL 5 BASIC31.62■■■□□ 2.65
SBNO1A3KN83 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.62■■■□□ 2.65
SBNO1A3KN83 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC31.62■■■□□ 2.65
SBNO1A3KN83 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SBNO1A3KN83 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.62■■■□□ 2.65
SBNO1A3KN83 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SBNO1A3KN83 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
SBNO1A3KN83 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.61■■■□□ 2.65
SBNO1A3KN83 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SBNO1A3KN83 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SBNO1A3KN83 AC008764.7-201ENST00000593779 1081 ntBASIC31.61■■■□□ 2.65
SBNO1A3KN83 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SBNO1A3KN83 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SBNO1A3KN83 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SBNO1A3KN83 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SBNO1A3KN83 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SBNO1A3KN83 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SBNO1A3KN83 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SBNO1A3KN83 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SBNO1A3KN83 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SBNO1A3KN83 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.59■■■□□ 2.65
SBNO1A3KN83 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.59■■■□□ 2.65
SBNO1A3KN83 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SBNO1A3KN83 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.59■■■□□ 2.65
SBNO1A3KN83 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SBNO1A3KN83 AC136469.2-201ENST00000623944 1028 ntBASIC31.58■■■□□ 2.65
SBNO1A3KN83 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SBNO1A3KN83 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SBNO1A3KN83 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.58■■■□□ 2.65
SBNO1A3KN83 AC131274.2-201ENST00000580697 1507 ntBASIC31.58■■■□□ 2.65
SBNO1A3KN83 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC31.58■■■□□ 2.65
SBNO1A3KN83 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
SBNO1A3KN83 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SBNO1A3KN83 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SBNO1A3KN83 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.57■■■□□ 2.64
SBNO1A3KN83 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
SBNO1A3KN83 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.57■■■□□ 2.64
SBNO1A3KN83 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SBNO1A3KN83 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.56■■■□□ 2.64
SBNO1A3KN83 RARRES2P11-201ENST00000635158 484 ntBASIC31.56■■■□□ 2.64
SBNO1A3KN83 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC31.55■■■□□ 2.64
SBNO1A3KN83 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
SBNO1A3KN83 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.55■■■□□ 2.64
SBNO1A3KN83 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.55■■■□□ 2.64
SBNO1A3KN83 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.55■■■□□ 2.64
SBNO1A3KN83 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.55■■■□□ 2.64
SBNO1A3KN83 AC009102.2-201ENST00000606772 1639 ntBASIC31.54■■■□□ 2.64
SBNO1A3KN83 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SBNO1A3KN83 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
SBNO1A3KN83 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
SBNO1A3KN83 AC090192.1-201ENST00000517740 490 ntBASIC31.54■■■□□ 2.64
SBNO1A3KN83 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SBNO1A3KN83 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SBNO1A3KN83 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SBNO1A3KN83 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SBNO1A3KN83 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC31.53■■■□□ 2.64
SBNO1A3KN83 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SBNO1A3KN83 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
SBNO1A3KN83 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
SBNO1A3KN83 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.53■■■□□ 2.64
SBNO1A3KN83 SP2-202ENST00000613139 908 ntTSL 5 BASIC31.53■■■□□ 2.64
SBNO1A3KN83 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.53■■■□□ 2.64
SBNO1A3KN83 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SBNO1A3KN83 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SBNO1A3KN83 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SBNO1A3KN83 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.52■■■□□ 2.64
SBNO1A3KN83 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SBNO1A3KN83 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.52■■■□□ 2.64
SBNO1A3KN83 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
SBNO1A3KN83 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
SBNO1A3KN83 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC31.52■■■□□ 2.64
SBNO1A3KN83 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.52■■■□□ 2.64
SBNO1A3KN83 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SBNO1A3KN83 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.51■■■□□ 2.63
SBNO1A3KN83 C17orf82-201ENST00000623772 1530 ntBASIC31.51■■■□□ 2.63
SBNO1A3KN83 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC31.5■■■□□ 2.63
SBNO1A3KN83 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.5■■■□□ 2.63
SBNO1A3KN83 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.5■■■□□ 2.63
SBNO1A3KN83 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.49■■■□□ 2.63
SBNO1A3KN83 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SBNO1A3KN83 AL121749.1-202ENST00000609313 2153 ntBASIC31.49■■■□□ 2.63
SBNO1A3KN83 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SBNO1A3KN83 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
SBNO1A3KN83 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
SBNO1A3KN83 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
SBNO1A3KN83 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SBNO1A3KN83 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
SBNO1A3KN83 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SBNO1A3KN83 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.48■■■□□ 2.63
SBNO1A3KN83 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.48■■■□□ 2.63
SBNO1A3KN83 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
SBNO1A3KN83 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms