Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.57■□□□□ 0.88
TRGV8A0A0C4DH27 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 SERBP1P1-201ENST00000396021 1160 ntBASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 AC099791.2-201ENST00000605725 427 ntBASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 CA15P2-201ENST00000611168 834 ntBASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV8A0A0C4DH27 AC010501.1-201ENST00000606270 1962 ntBASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRGV8A0A0C4DH27 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 MIR6821-201ENST00000617625 74 ntBASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 RASA4CP-201ENST00000424092 1398 ntBASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV8A0A0C4DH27 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRGV8A0A0C4DH27 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV8A0A0C4DH27 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.53■□□□□ 0.88
TRGV8A0A0C4DH27 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.53■□□□□ 0.88
TRGV8A0A0C4DH27 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRGV8A0A0C4DH27 AC008764.7-201ENST00000593779 1081 ntBASIC20.53■□□□□ 0.88
TRGV8A0A0C4DH27 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRGV8A0A0C4DH27 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRGV8A0A0C4DH27 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.52■□□□□ 0.88
TRGV8A0A0C4DH27 AC027682.1-201ENST00000562846 899 ntBASIC20.52■□□□□ 0.88
TRGV8A0A0C4DH27 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.52■□□□□ 0.88
TRGV8A0A0C4DH27 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.52■□□□□ 0.88
TRGV8A0A0C4DH27 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRGV8A0A0C4DH27 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
TRGV8A0A0C4DH27 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRGV8A0A0C4DH27 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 AC097381.1-201ENST00000429019 1296 ntBASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV8A0A0C4DH27 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 AC087623.3-201ENST00000607047 1098 ntBASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV8A0A0C4DH27 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRGV8A0A0C4DH27 AC131274.2-201ENST00000580697 1507 ntBASIC20.48■□□□□ 0.87
TRGV8A0A0C4DH27 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.48■□□□□ 0.87
TRGV8A0A0C4DH27 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRGV8A0A0C4DH27 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.48■□□□□ 0.87
TRGV8A0A0C4DH27 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.48■□□□□ 0.87
TRGV8A0A0C4DH27 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.48■□□□□ 0.87
TRGV8A0A0C4DH27 AC011298.3-201ENST00000615796 283 ntBASIC20.48■□□□□ 0.87
TRGV8A0A0C4DH27 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms