Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV12-3A0A0B4J271 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV12-3A0A0B4J271 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV12-3A0A0B4J271 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV12-3A0A0B4J271 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 LONRF2P2-201ENST00000439212 571 ntBASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.01■□□□□ 0.31
TRAV12-3A0A0B4J271 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAV12-3A0A0B4J271 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV12-3A0A0B4J271 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV12-3A0A0B4J271 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV12-3A0A0B4J271 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV12-3A0A0B4J271 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TRAV12-3A0A0B4J271 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 BHLHE23-202ENST00000612929 1109 ntBASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV12-3A0A0B4J271 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV12-3A0A0B4J271 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV12-3A0A0B4J271 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV12-3A0A0B4J271 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TRAV12-3A0A0B4J271 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV12-3A0A0B4J271 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV12-3A0A0B4J271 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.96■□□□□ 0.3
TRAV12-3A0A0B4J271 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV12-3A0A0B4J271 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV12-3A0A0B4J271 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms