Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX49Q9Y6V7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
DDX49Q9Y6V7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DDX49Q9Y6V7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
DDX49Q9Y6V7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
DDX49Q9Y6V7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 AC079776.1-201ENST00000401540 1152 ntBASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 AL512384.1-201ENST00000406683 331 ntBASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 MYCLP2-201ENST00000449268 967 ntBASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 LINC01115-203ENST00000606068 577 ntBASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 MIR6069-201ENST00000620069 79 ntBASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
DDX49Q9Y6V7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 AC007326.2-201ENST00000624224 7579 ntBASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC18.27■□□□□ 0.51
DDX49Q9Y6V7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 AP006294.1-201ENST00000415407 339 ntBASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 ATP5G2P4-201ENST00000442175 420 ntBASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 AC123567.1-201ENST00000548294 1261 ntBASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
DDX49Q9Y6V7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.25■□□□□ 0.51
DDX49Q9Y6V7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms