Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 MIR5189-201ENST00000577370 114 ntBASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 CLUHP6-201ENST00000580789 941 ntBASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 MIR4259-201ENST00000584466 101 ntBASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPH3AQ9Y2J0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPH3AQ9Y2J0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AL009178.2-201ENST00000597278 2719 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AL359258.3-201ENST00000622910 2331 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 FAM86MP-201ENST00000340703 885 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AC008735.3-201ENST00000596646 500 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 RPSAP52-203ENST00000622976 1023 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 BX539320.1-201ENST00000623759 877 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 MSTO2P-201ENST00000314835 1709 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 REXO1L6P-201ENST00000603433 1515 ntBASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPH3AQ9Y2J0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RPH3AQ9Y2J0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms