Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 HNRNPUP1-201ENST00000554987 333 ntBASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 AL607033.1-201ENST00000623900 1599 ntBASIC11.15□□□□□ -0.62
HHLA3Q9XRX5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
HHLA3Q9XRX5 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
HHLA3Q9XRX5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.15□□□□□ -0.63
HHLA3Q9XRX5 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
HHLA3Q9XRX5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
HHLA3Q9XRX5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
HHLA3Q9XRX5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 PPT1-213ENST00000641319 2388 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 AL080243.2-201ENST00000418783 582 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 HIST3H2BA-201ENST00000436555 524 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 RN7SL618P-201ENST00000477850 296 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 AC097359.3-201ENST00000603982 1210 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 AL158211.3-201ENST00000607385 239 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 TEX28P1-201ENST00000613479 1221 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 TEX28P2-201ENST00000617764 1221 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SPDYE12P-201ENST00000618416 771 ntBASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HHLA3Q9XRX5 AC127383.1-201ENST00000444697 1800 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms