Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZC3H4Q9UPT8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 AC006122.1-201ENST00000493323 440 ntBASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 AC114947.1-202ENST00000514136 344 ntBASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 AC002472.4-201ENST00000641915 272 ntBASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 AC011840.2-201ENST00000563063 1520 ntBASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZC3H4Q9UPT8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 LINC01165-201ENST00000445190 1623 ntBASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 LINC00634-202ENST00000505157 222 ntBASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 ALG3P1-201ENST00000508806 1114 ntBASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 AC007326.1-201ENST00000604539 458 ntBASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 AC006158.1-201ENST00000610661 249 ntBASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZC3H4Q9UPT8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 COX20P1-201ENST00000366529 357 ntBASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ZC3H4Q9UPT8 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms