Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 RPL18P13-201ENST00000478088 569 ntBASIC16.92■□□□□ 0.3
COL20A1Q9P218 AC005740.2-201ENST00000511085 419 ntBASIC16.92■□□□□ 0.3
COL20A1Q9P218 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 TUBBP5-203ENST00000508529 1334 ntBASIC16.92■□□□□ 0.3
COL20A1Q9P218 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL20A1Q9P218 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL20A1Q9P218 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 CROCCP1-201ENST00000426910 5675 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 SLC25A24P2-201ENST00000415059 510 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 CICP12-201ENST00000455801 843 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 TUBB8P8-201ENST00000458717 1058 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 AC013355.1-201ENST00000562625 723 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 AC008825.2-201ENST00000603374 718 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 Z98259.2-201ENST00000641583 609 ntBASIC16.91■□□□□ 0.3
COL20A1Q9P218 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL20A1Q9P218 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL20A1Q9P218 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL20A1Q9P218 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
COL20A1Q9P218 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 260 ms