Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CDC42SE2Q9NRR3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AC087386.2-201ENST00000623212 4637 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AL022342.1-201ENST00000400363 863 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AC069262.1-201ENST00000539058 672 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AL512361.1-201ENST00000554200 418 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AC010336.2-201ENST00000564226 506 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AC051619.7-201ENST00000568314 623 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TEX28P1-201ENST00000613479 1221 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TEX28P2-201ENST00000617764 1221 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AL109936.8-201ENST00000641772 604 ntBASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
CDC42SE2Q9NRR3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CDC42SE2Q9NRR3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms