Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF3Q9NR81 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARHGEF3Q9NR81 AC087481.3-201ENST00000602886 1894 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC138028.6-201ENST00000616106 1482 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AHCYP2-201ENST00000430630 1300 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC004898.1-201ENST00000451057 766 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC091804.1-201ENST00000486888 567 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AP001582.1-201ENST00000525856 295 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC068587.6-202ENST00000641839 5619 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC013726.1-201ENST00000563747 2285 ntBASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ARHGEF3Q9NR81 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AL121723.1-201ENST00000445194 1519 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CICP14-201ENST00000629111 2732 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AC136604.1-201ENST00000418535 575 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 MTX1P1-201ENST00000440904 838 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 PHKG1P2-201ENST00000457537 863 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AP006547.1-201ENST00000563435 692 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AC020914.3-201ENST00000594712 304 ntBASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.04■□□□□ 0.16
ARHGEF3Q9NR81 AC015967.2-201ENST00000624092 234 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms