Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC079781.5-202ENST00000641784 3743 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 ELL2P1-201ENST00000413990 1906 ntBASIC15□□□□□ -0.01
SSU72Q9NP77 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 MIR4453-201ENST00000584019 89 ntBASIC14.99□□□□□ -0.01
SSU72Q9NP77 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AC004461.2-201ENST00000629517 803 ntBASIC14.99□□□□□ -0.01
SSU72Q9NP77 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 AL591122.2-201ENST00000624125 1853 ntBASIC14.99□□□□□ -0.01
SSU72Q9NP77 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.99□□□□□ -0.01
SSU72Q9NP77 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 KRT8P35-201ENST00000483942 1338 ntBASIC14.98□□□□□ -0.01
SSU72Q9NP77 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSU72Q9NP77 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.98□□□□□ -0.01
SSU72Q9NP77 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms