Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC083799.1-201ENST00000366451 910 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AL133267.1-201ENST00000398220 340 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 BCAS2P3-201ENST00000416374 767 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 FAM58DP-201ENST00000428076 619 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 UBE2V2P3-201ENST00000433562 437 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AL139220.1-201ENST00000436802 520 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 TIMM8BP1-201ENST00000452384 211 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC108729.1-201ENST00000487812 947 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 GATB-205ENST00000508611 605 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 SLC25A1P1-201ENST00000528351 927 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 RN7SL488P-201ENST00000585186 286 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AL451086.1-201ENST00000605596 223 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC239803.2-201ENST00000610161 430 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC018529.1-201ENST00000613063 361 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC068057.2-201ENST00000624047 895 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC008993.2-201ENST00000631744 806 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AF228730.6-201ENST00000641497 218 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC084121.3-201ENST00000641716 218 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AL354702.1-201ENST00000442006 1960 ntBASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
KRTAP3-1Q9BYR8 AC130448.1-201ENST00000624179 1733 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms