Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
TRAF4Q9BUZ4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 Z97205.2-201ENST00000564697 1639 ntBASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AC098850.1-201ENST00000419919 790 ntBASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 EEF1DP4-201ENST00000446006 880 ntBASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AC106886.1-201ENST00000568660 600 ntBASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 TMEM261P1-201ENST00000604899 340 ntBASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAF4Q9BUZ4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 ZBED1P1-201ENST00000502364 1930 ntBASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 TTTY23B-201ENST00000442790 549 ntBASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 AC104596.2-201ENST00000512793 793 ntBASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 SBF1P1-201ENST00000444527 5631 ntBASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAF4Q9BUZ4 KRT8P37-201ENST00000451609 1420 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms