Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 KC6-207ENST00000600644 2311 ntTSL 3 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 VDAC1P7-201ENST00000462417 847 ntBASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AC004066.1-201ENST00000502488 802 ntBASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AC025048.6-201ENST00000634326 1161 ntBASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AL645728.2-202ENST00000641679 227 ntBASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 SNX18-202ENST00000343017 3140 ntBASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
YIPF4Q9BSR8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AC018529.2-202ENST00000611482 3087 ntBASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AC104457.1-201ENST00000401024 814 ntBASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 CR383656.12-201ENST00000549567 513 ntBASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 AC107373.2-201ENST00000607735 490 ntBASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 MIR8072-201ENST00000614241 80 ntBASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
YIPF4Q9BSR8 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms