Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 DUSP5P1-201ENST00000441325 1139 ntBASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 HCG4P8-203ENST00000443049 980 ntBASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 AC004899.2-201ENST00000622993 3860 ntBASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 AL354702.1-201ENST00000442006 1960 ntBASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3IPQ96QF0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 FAM185BP-201ENST00000443595 716 ntBASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 AC099336.1-202ENST00000602961 463 ntBASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 AC008667.4-201ENST00000607370 168 ntBASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 REXO1L4P-201ENST00000605109 1937 ntBASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3IPQ96QF0 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB3IPQ96QF0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms