Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.07■□□□□ 0.16
DDX1Q92499 PFN1P12-201ENST00000455938 534 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 AC093433.1-201ENST00000458048 571 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 AC022137.2-201ENST00000503482 481 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.07■□□□□ 0.16
DDX1Q92499 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.07■□□□□ 0.16
DDX1Q92499 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.07■□□□□ 0.16
DDX1Q92499 CU634019.7-201ENST00000624153 1185 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 FP236241.2-201ENST00000624906 1185 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 MSTO2P-201ENST00000314835 1709 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 AC055811.4-201ENST00000624039 1754 ntBASIC16.07■□□□□ 0.16
DDX1Q92499 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.07■□□□□ 0.16
DDX1Q92499 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
DDX1Q92499 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
DDX1Q92499 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.06■□□□□ 0.16
DDX1Q92499 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
DDX1Q92499 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.06■□□□□ 0.16
DDX1Q92499 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.06■□□□□ 0.16
DDX1Q92499 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.06■□□□□ 0.16
DDX1Q92499 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.06■□□□□ 0.16
DDX1Q92499 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
DDX1Q92499 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.06■□□□□ 0.16
DDX1Q92499 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 AL162726.2-201ENST00000438986 1017 ntBASIC16.06■□□□□ 0.16
DDX1Q92499 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.06■□□□□ 0.16
DDX1Q92499 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.06■□□□□ 0.16
DDX1Q92499 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.06■□□□□ 0.16
DDX1Q92499 SNX29P1-201ENST00000548357 1007 ntBASIC16.06■□□□□ 0.16
DDX1Q92499 AC004466.1-201ENST00000599515 1080 ntBASIC16.06■□□□□ 0.16
DDX1Q92499 AL603764.1-201ENST00000636452 321 ntBASIC16.06■□□□□ 0.16
DDX1Q92499 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.06■□□□□ 0.16
DDX1Q92499 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
DDX1Q92499 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DDX1Q92499 AC005089.1-201ENST00000619486 2241 ntBASIC16.06■□□□□ 0.16
DDX1Q92499 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.06■□□□□ 0.16
DDX1Q92499 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
DDX1Q92499 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DDX1Q92499 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 AL136379.1-201ENST00000623471 2642 ntBASIC16.05■□□□□ 0.16
DDX1Q92499 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DDX1Q92499 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms