Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC013726.1-201ENST00000563747 2285 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 RPSAP12-201ENST00000435879 888 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 NALT1-202ENST00000450304 437 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC026336.4-201ENST00000624565 1050 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AL356583.1-201ENST00000398739 1371 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 HNRNPA1P68-201ENST00000425806 979 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC006987.4-201ENST00000430032 279 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PTS-204ENST00000525803 625 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 FAAP24-205ENST00000590281 865 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CETN3-205ENST00000522842 664 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PKD1P6-201ENST00000343738 4769 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC007322.2-201ENST00000414540 605 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AF186996.6-201ENST00000485294 149 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 DNM1P17-201ENST00000512082 426 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC063977.2-201ENST00000601996 421 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PTAFR-201ENST00000305392 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 MROH4P-201ENST00000431302 1578 ntBASIC5.86□□□□□ -1.47
SYNE2Q8WXH0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 AC012313.1-201ENST00000593393 3059 ntBASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 MYL2-201ENST00000228841 807 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 FPGT-205ENST00000482102 561 ntTSL 4 BASIC5.85□□□□□ -1.47
SYNE2Q8WXH0 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms