Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC007787.1-201ENST00000588095 1583 ntBASIC15.45■□□□□ 0.06
PTCD2Q8WV60 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AL121578.1-201ENST00000428051 892 ntBASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 MTND2P3-201ENST00000452458 470 ntBASIC15.45■□□□□ 0.06
PTCD2Q8WV60 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AL359711.2-201ENST00000563105 872 ntBASIC15.45■□□□□ 0.06
PTCD2Q8WV60 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.45■□□□□ 0.06
PTCD2Q8WV60 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 SEPT7P7-201ENST00000420492 1301 ntBASIC15.44■□□□□ 0.06
PTCD2Q8WV60 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AL117378.2-201ENST00000622916 1337 ntBASIC15.44■□□□□ 0.06
PTCD2Q8WV60 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AL512384.1-201ENST00000406683 331 ntBASIC15.44■□□□□ 0.06
PTCD2Q8WV60 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 KRT17P7-201ENST00000451704 1104 ntBASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 GIMAP3P-201ENST00000495150 836 ntBASIC15.44■□□□□ 0.06
PTCD2Q8WV60 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
PTCD2Q8WV60 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms