Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 AC015871.4-201ENST00000624650 2260 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ANO10-201ENST00000292246 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 AL772363.1-201ENST00000371390 3222 ntTSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 AC011199.1-201ENST00000625022 3362 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 SLC22A20-204ENST00000530038 1673 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 MTND5P12-201ENST00000502851 1449 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 CXCR2P1-201ENST00000439871 2503 ntTSL 3 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 CERS2-214ENST00000561294 1803 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 TACC2-206ENST00000368999 3879 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AC008620.2-201ENST00000510294 1569 ntBASIC9.12□□□□□ -0.95
SVIPQ8NHG7 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 LINC00562-201ENST00000566385 2470 ntBASIC9.12□□□□□ -0.95
SVIPQ8NHG7 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AL139348.1-201ENST00000569070 2208 ntBASIC9.12□□□□□ -0.95
SVIPQ8NHG7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 IPO7P2-201ENST00000451446 1750 ntBASIC9.12□□□□□ -0.95
SVIPQ8NHG7 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 EIF4B-202ENST00000416762 1985 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AC008691.1-205ENST00000635333 1963 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 SSPN-207ENST00000540266 587 ntTSL 4 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 RIPOR1-203ENST00000422602 3990 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 CREM-207ENST00000356917 1895 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 SALL4P1-201ENST00000510352 1860 ntBASIC9.12□□□□□ -0.95
SVIPQ8NHG7 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AC023509.2-201ENST00000548347 2297 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 CEP85-209ENST00000640292 2286 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 TRIM31-210ENST00000376734 2043 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 PISD-203ENST00000397500 2194 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AC009264.1-205ENST00000439694 2160 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 C5orf66-AS2-201ENST00000505663 2162 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 USP31-201ENST00000219689 10699 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 RCC2P6-201ENST00000526625 1557 ntBASIC9.12□□□□□ -0.95
SVIPQ8NHG7 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SVIPQ8NHG7 LUZP1-202ENST00000314174 3715 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SVIPQ8NHG7 DNAJA2-201ENST00000317089 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms