Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 SSR4P1-203ENST00000599569 2260 ntBASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 CTBP2P6-201ENST00000526402 1229 ntBASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 AC139712.1-201ENST00000378256 1875 ntBASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 AC090616.6-203ENST00000579186 1945 ntBASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC19.43■□□□□ 0.7
COL22A1Q8NFW1 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 AC092135.3-201ENST00000624151 1846 ntBASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 EEF1DP5-201ENST00000431410 772 ntBASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 SOD2-205ENST00000444946 917 ntTSL 2 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 AC113347.2-201ENST00000512350 279 ntBASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 CASP3-205ENST00000517513 964 ntTSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 DLK1-205ENST00000556051 469 ntTSL 2 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.42■□□□□ 0.7
COL22A1Q8NFW1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 NHP2P1-201ENST00000335274 462 ntBASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 SNX15-201ENST00000352068 771 ntTSL 5 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 AC022080.1-201ENST00000366255 781 ntBASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 FKBP4P8-201ENST00000610931 1369 ntBASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 AC067931.2-201ENST00000623655 2003 ntBASIC19.41■□□□□ 0.7
COL22A1Q8NFW1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 PSAT1P2-201ENST00000426107 972 ntBASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 RNLS-203ENST00000437752 525 ntTSL 2 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 SEPHS2P1-201ENST00000511618 1162 ntBASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 AC087203.1-201ENST00000532111 1181 ntBASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 AP005264.5-201ENST00000590066 467 ntBASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL22A1Q8NFW1 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms