Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AC055811.4-201ENST00000624039 1754 ntBASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATPAF2Q8N5M1 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 CICP23-201ENST00000605013 2741 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 AL035633.1-201ENST00000406139 838 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 ACTG1P3-201ENST00000431775 1114 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 AC007389.4-201ENST00000454674 793 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 INE1-201ENST00000456273 945 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 GIMAP3P-201ENST00000495150 836 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 RPSAP52-203ENST00000622976 1023 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 AL603764.1-201ENST00000636452 321 ntBASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ATPAF2Q8N5M1 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ATPAF2Q8N5M1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 MSTO2P-201ENST00000314835 1709 ntBASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 AC134312.5-201ENST00000568031 1313 ntBASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 AL512384.1-201ENST00000406683 331 ntBASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 BAATP1-201ENST00000412284 1225 ntBASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 AC012441.1-201ENST00000446669 685 ntBASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 DUX4L47-201ENST00000566374 394 ntBASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.51■□□□□ 0.07
ATPAF2Q8N5M1 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms