Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SIX5Q8N196 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.52■□□□□ 0.08
SIX5Q8N196 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.52■□□□□ 0.08
SIX5Q8N196 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SIX5Q8N196 RN7SL8P-201ENST00000461771 266 ntBASIC15.52■□□□□ 0.08
SIX5Q8N196 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
SIX5Q8N196 AC116345.2-201ENST00000512837 523 ntBASIC15.52■□□□□ 0.08
SIX5Q8N196 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.52■□□□□ 0.08
SIX5Q8N196 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.52■□□□□ 0.08
SIX5Q8N196 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.52■□□□□ 0.08
SIX5Q8N196 AC090857.1-201ENST00000527400 390 ntBASIC15.52■□□□□ 0.08
SIX5Q8N196 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.52■□□□□ 0.08
SIX5Q8N196 NPM1P43-201ENST00000558669 786 ntBASIC15.52■□□□□ 0.08
SIX5Q8N196 AC135983.4-201ENST00000564116 1262 ntBASIC15.52■□□□□ 0.08
SIX5Q8N196 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
SIX5Q8N196 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.52■□□□□ 0.08
SIX5Q8N196 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.52■□□□□ 0.08
SIX5Q8N196 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.52■□□□□ 0.08
SIX5Q8N196 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 AC068587.8-201ENST00000641239 219 ntBASIC15.52■□□□□ 0.08
SIX5Q8N196 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.52■□□□□ 0.08
SIX5Q8N196 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SIX5Q8N196 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.52■□□□□ 0.07
SIX5Q8N196 AC092171.3-201ENST00000610122 2651 ntBASIC15.52■□□□□ 0.07
SIX5Q8N196 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.52■□□□□ 0.07
SIX5Q8N196 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.52■□□□□ 0.07
SIX5Q8N196 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.52■□□□□ 0.07
SIX5Q8N196 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.07
SIX5Q8N196 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SIX5Q8N196 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SIX5Q8N196 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 AC022188.1-201ENST00000620960 1664 ntBASIC15.51■□□□□ 0.07
SIX5Q8N196 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.51■□□□□ 0.07
SIX5Q8N196 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SIX5Q8N196 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 MIR648-201ENST00000385046 94 ntBASIC15.51■□□□□ 0.07
SIX5Q8N196 AC026316.1-201ENST00000398900 414 ntBASIC15.51■□□□□ 0.07
SIX5Q8N196 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.51■□□□□ 0.07
SIX5Q8N196 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.51■□□□□ 0.07
SIX5Q8N196 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.51■□□□□ 0.07
SIX5Q8N196 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.51■□□□□ 0.07
SIX5Q8N196 AC006453.1-201ENST00000636037 1257 ntBASIC15.51■□□□□ 0.07
SIX5Q8N196 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.51■□□□□ 0.07
SIX5Q8N196 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SIX5Q8N196 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
SIX5Q8N196 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.5■□□□□ 0.07
SIX5Q8N196 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.5■□□□□ 0.07
SIX5Q8N196 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SIX5Q8N196 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms