Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 BRD7P5-201ENST00000299197 1822 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 GUSBP10-201ENST00000417412 665 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AC092638.2-201ENST00000441105 947 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AC002044.2-201ENST00000624910 970 ntBASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.8□□□□□ -0.2
COL27A1Q8IZC6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 MIR1227-201ENST00000408484 88 ntBASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 RN7SL396P-201ENST00000471086 295 ntBASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 C2orf69P1-201ENST00000563532 1093 ntBASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COL27A1Q8IZC6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 RN7SKP109-201ENST00000410592 316 ntBASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ERP29P1-201ENST00000442902 706 ntBASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 DUX4L50-201ENST00000455245 715 ntBASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ALG1L6P-201ENST00000515248 758 ntBASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COL27A1Q8IZC6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms