Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 RARRES2P5-201ENST00000564013 466 ntBASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AL049840.4-201ENST00000602422 811 ntBASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AC005089.1-201ENST00000619486 2241 ntBASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 DRD5P1-201ENST00000456605 1438 ntBASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LINC00346Q8IVM7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 AC018442.1-201ENST00000421439 2061 ntBASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 AL360270.3-201ENST00000609118 1348 ntBASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 VDAC1P7-201ENST00000462417 847 ntBASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 GAPDHP40-201ENST00000505218 1006 ntBASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 RFPL4AP1-201ENST00000530883 850 ntBASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 GPALPP1-207ENST00000611650 899 ntBASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 AC097359.2-201ENST00000604992 2389 ntBASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LINC00346Q8IVM7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.43□□□□□ -0.26
LINC00346Q8IVM7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms