Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RAB11FIP4Q86YS3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 AC023090.2-201ENST00000625182 2110 ntBASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RAB11FIP4Q86YS3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 KRT8P35-201ENST00000483942 1338 ntBASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 USP32P1-208ENST00000506594 1164 ntBASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RAB11FIP4Q86YS3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 KRT8P14-201ENST00000414254 1442 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 BAATP1-201ENST00000412284 1225 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 ACTG1P3-201ENST00000431775 1114 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 AC011495.1-201ENST00000498085 584 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 AC022137.2-201ENST00000503482 481 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 AP001889.1-201ENST00000525414 633 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 AP005019.2-201ENST00000615104 511 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 LRRC59-203ENST00000576448 1531 ntBASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RAB11FIP4Q86YS3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms