Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 AHCYP4-201ENST00000419201 1315 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 RN7SL530P-201ENST00000485097 298 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 AC131206.1-201ENST00000538078 1211 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 AC002044.2-201ENST00000624910 970 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 PCDH8P1-201ENST00000428983 2773 ntBASIC18.57■□□□□ 0.56
COL23A1Q86Y22 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL23A1Q86Y22 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AL512306.1-201ENST00000432698 848 ntBASIC18.56■□□□□ 0.56
COL23A1Q86Y22 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 RPL35P9-201ENST00000446059 350 ntBASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AL135901.1-201ENST00000451812 333 ntBASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AC068867.1-201ENST00000559855 150 ntBASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AC007250.1-201ENST00000608934 338 ntBASIC18.56■□□□□ 0.56
COL23A1Q86Y22 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 NKILA-202ENST00000614771 2598 ntBASIC18.56■□□□□ 0.56
COL23A1Q86Y22 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.56■□□□□ 0.56
COL23A1Q86Y22 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AC021305.1-201ENST00000520656 1514 ntBASIC18.55■□□□□ 0.56
COL23A1Q86Y22 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AC023090.2-201ENST00000625182 2110 ntBASIC18.55■□□□□ 0.56
COL23A1Q86Y22 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AL357373.1-201ENST00000394974 322 ntBASIC18.55■□□□□ 0.56
COL23A1Q86Y22 RN7SKP109-201ENST00000410592 316 ntBASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PEBP1P2-201ENST00000603980 558 ntBASIC18.55■□□□□ 0.56
COL23A1Q86Y22 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
COL23A1Q86Y22 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms