Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC018629.1-201ENST00000623381 1736 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 PRAL-201ENST00000624952 3286 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 BANF1P3-201ENST00000412556 261 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 TSPY25P-201ENST00000429463 745 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AL627422.1-201ENST00000434104 580 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 DUTP3-201ENST00000450025 415 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 SIGLEC18P-201ENST00000602271 909 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC087392.5-201ENST00000612517 489 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC092299.1-201ENST00000632679 757 ntBASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CNKSR3Q6P9H4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CNKSR3Q6P9H4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 RPSAP15-201ENST00000448168 861 ntBASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 NDUFS6P1-201ENST00000485187 316 ntBASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.01■□□□□ 0.15
CNKSR3Q6P9H4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNKSR3Q6P9H4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms