Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AC005229.1-201ENST00000392885 409 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AC022137.2-201ENST00000503482 481 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 AP001889.1-201ENST00000525414 633 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 SLC25A47P1-201ENST00000531577 414 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 AC009486.1-201ENST00000569860 813 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AC025181.2-201ENST00000606994 802 ntBASIC15.91■□□□□ 0.14
RNF43Q68DV7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF43Q68DV7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RNF43Q68DV7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AC005840.4-201ENST00000541242 2494 ntBASIC15.9■□□□□ 0.14
RNF43Q68DV7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AC099336.1-201ENST00000417053 1171 ntBASIC15.9■□□□□ 0.14
RNF43Q68DV7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AC012441.1-201ENST00000446669 685 ntBASIC15.9■□□□□ 0.14
RNF43Q68DV7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 PFN1P12-201ENST00000455938 534 ntBASIC15.9■□□□□ 0.14
RNF43Q68DV7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 RNA5SP412-201ENST00000516234 123 ntBASIC15.9■□□□□ 0.14
RNF43Q68DV7 AC068587.3-201ENST00000526613 355 ntBASIC15.9■□□□□ 0.14
RNF43Q68DV7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AC084364.1-201ENST00000551967 1556 ntBASIC15.9■□□□□ 0.14
RNF43Q68DV7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF43Q68DV7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF43Q68DV7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
RNF43Q68DV7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF43Q68DV7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RNF43Q68DV7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 302.4 ms