Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 TMBIM7P-203ENST00000641617 1718 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 ACE3P-201ENST00000423435 1973 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AC138701.2-201ENST00000553634 226 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AC013553.1-201ENST00000560906 267 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AC009093.10-201ENST00000641956 1442 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 UROS-201ENST00000368774 744 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 MIR566-201ENST00000385187 94 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 KRT17P4-201ENST00000429445 819 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 ENPP7P8-202ENST00000527856 1345 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 PPT1-215ENST00000641471 2368 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AC092135.3-201ENST00000624151 1846 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 KRT18P37-201ENST00000520711 1282 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AL139339.2-201ENST00000608063 657 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 AC064801.2-201ENST00000625052 1303 ntBASIC9.82□□□□□ -0.84
VPS13DQ5THJ4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 BRD7P5-201ENST00000299197 1822 ntBASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AC004522.1-201ENST00000419978 654 ntBASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AC026470.1-201ENST00000478038 846 ntBASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AC008972.2-201ENST00000606587 494 ntBASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 COQ4-204ENST00000608951 781 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 MARK2P16-201ENST00000605714 1723 ntBASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms