Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PCDHB19P-201ENST00000570871 2371 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 MIR648-201ENST00000385046 94 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 OR2R1P-201ENST00000441404 914 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 BCRP4-201ENST00000506079 804 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 TRMT112P3-201ENST00000580149 358 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 RN7SL357P-201ENST00000581065 298 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 ZNF436-AS1-201ENST00000335648 2547 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 AHCYP4-201ENST00000419201 1315 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 AC092580.1-201ENST00000433998 658 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 IGHV1-12-201ENST00000518307 205 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 KNOP1P1-201ENST00000542108 989 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC12.84□□□□□ -0.35
LRRK2Q5S007 MIR6720-201ENST00000611664 98 ntBASIC12.84□□□□□ -0.35
LRRK2Q5S007 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LRRK2Q5S007 WASH3P-207ENST00000560956 1394 ntBASIC12.83□□□□□ -0.35
LRRK2Q5S007 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 AC012508.2-201ENST00000567613 1472 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 PTGER4P2-201ENST00000328411 252 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 PTGER4P3-201ENST00000458150 252 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 RPS18P9-201ENST00000482817 460 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 RN7SL582P-201ENST00000491078 279 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 AC010632.2-201ENST00000588369 1224 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 AL645608.8-201ENST00000606034 2086 ntBASIC12.83□□□□□ -0.36
LRRK2Q5S007 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
LRRK2Q5S007 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LRRK2Q5S007 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms