Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 AC021723.1-201ENST00000486306 515 ntBASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 KRT8P29-201ENST00000420409 1371 ntBASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RNFT1Q5M7Z0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 DPM3-202ENST00000368399 517 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 CYP46A4P-201ENST00000414953 267 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 HNRNPA1P23-201ENST00000491091 1133 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AC009955.4-201ENST00000597192 544 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AC138649.2-201ENST00000615886 705 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AL162426.1-201ENST00000624141 743 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AL138725.1-201ENST00000407347 1314 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 E2F3P2-201ENST00000447755 1422 ntBASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.55□□□□□ -0.24
RNFT1Q5M7Z0 AC132872.4-202ENST00000622924 2756 ntBASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RNFT1Q5M7Z0 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms