Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 FTH1P14-201ENST00000482930 551 ntBASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 CLUHP2-201ENST00000426660 1303 ntBASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 AC099063.4-201ENST00000641099 1602 ntBASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRICKLE4Q2TBC4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AC063926.3-201ENST00000624734 5658 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 TLE1P1-201ENST00000422965 589 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AC007969.1-201ENST00000433675 447 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 C2orf27AP3-201ENST00000434123 579 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 MESTP3-201ENST00000503460 968 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AL354718.3-201ENST00000616414 581 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 CR382287.1-201ENST00000623954 586 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AC003102.2-201ENST00000589195 1469 ntBASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRICKLE4Q2TBC4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.02□□□□□ -0.16
PRICKLE4Q2TBC4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRICKLE4Q2TBC4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PRICKLE4Q2TBC4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.02□□□□□ -0.17
PRICKLE4Q2TBC4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.02□□□□□ -0.17
PRICKLE4Q2TBC4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms