Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
ERCC6LQ2NKX8 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 AL450487.1-201ENST00000426799 995 ntBASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 AP002414.3-201ENST00000589352 1468 ntBASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
ERCC6LQ2NKX8 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AC004870.1-201ENST00000315132 882 ntBASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AC073648.2-201ENST00000510116 352 ntBASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AF238378.1-201ENST00000526806 358 ntBASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 AC005593.1-201ENST00000624894 515 ntBASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ERCC6LQ2NKX8 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms