Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC9.01□□□□□ -0.97
HSPG2P98160 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 AL591122.2-201ENST00000624125 1853 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 ZNF877P-201ENST00000437614 612 ntBASIC9.01□□□□□ -0.97
HSPG2P98160 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC9.01□□□□□ -0.97
HSPG2P98160 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC9.01□□□□□ -0.97
HSPG2P98160 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
HSPG2P98160 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC9□□□□□ -0.97
HSPG2P98160 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC9□□□□□ -0.97
HSPG2P98160 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 AL773545.2-201ENST00000442149 472 ntBASIC9□□□□□ -0.97
HSPG2P98160 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC9□□□□□ -0.97
HSPG2P98160 AC008494.1-201ENST00000497612 796 ntBASIC9□□□□□ -0.97
HSPG2P98160 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC9□□□□□ -0.97
HSPG2P98160 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9□□□□□ -0.97
HSPG2P98160 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
HSPG2P98160 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 TLE1P1-201ENST00000422965 589 ntBASIC9□□□□□ -0.97
HSPG2P98160 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC9□□□□□ -0.97
HSPG2P98160 AL357143.1-203ENST00000639750 881 ntBASIC9□□□□□ -0.97
HSPG2P98160 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC9□□□□□ -0.97
HSPG2P98160 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 OR7E115P-201ENST00000382617 1024 ntBASIC9□□□□□ -0.97
HSPG2P98160 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 ABCC6P2-201ENST00000526069 590 ntBASIC9□□□□□ -0.97
HSPG2P98160 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC9□□□□□ -0.97
HSPG2P98160 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 HNRNPA1P16-201ENST00000575692 955 ntBASIC9□□□□□ -0.97
HSPG2P98160 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC9□□□□□ -0.97
HSPG2P98160 AC087072.1-201ENST00000603727 421 ntBASIC9□□□□□ -0.97
HSPG2P98160 AL136172.1-201ENST00000598590 1394 ntBASIC9□□□□□ -0.97
HSPG2P98160 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
HSPG2P98160 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC9□□□□□ -0.97
HSPG2P98160 AP000845.1-201ENST00000581677 2131 ntBASIC8.99□□□□□ -0.97
HSPG2P98160 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
HSPG2P98160 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
HSPG2P98160 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 HNRNPABP1-201ENST00000406003 734 ntBASIC8.99□□□□□ -0.97
HSPG2P98160 ALG1L15P-201ENST00000482834 794 ntBASIC8.99□□□□□ -0.97
HSPG2P98160 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC8.99□□□□□ -0.97
HSPG2P98160 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC8.99□□□□□ -0.97
HSPG2P98160 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC8.99□□□□□ -0.97
HSPG2P98160 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms