Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 ACTBP8-201ENST00000403258 1108 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 GIMAP3P-201ENST00000495150 836 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 AP001063.1-201ENST00000568332 529 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 AC140912.1-201ENST00000577171 1054 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 AC008494.3-201ENST00000606615 944 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.23□□□□□ -0.29
HIST1H3AP68431 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
HIST1H3AP68431 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HIST1H3AP68431 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 OR2I1P-210ENST00000642037 4691 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 EIF3FP3-201ENST00000434851 1086 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 AL162726.2-201ENST00000438986 1017 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 TP53TG3HP-202ENST00000569755 579 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 MIR4745-201ENST00000577608 62 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 AL355385.1-201ENST00000606123 409 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 WFDC1-204ENST00000613603 549 ntBASIC13.22□□□□□ -0.29
HIST1H3AP68431 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HIST1H3AP68431 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HIST1H3AP68431 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms