Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
LMO4P61968 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LMO4P61968 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO4P61968 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO4P61968 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 UPF3AP2-201ENST00000457924 1132 ntBASIC12.3□□□□□ -0.44
LMO4P61968 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO4P61968 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO4P61968 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO4P61968 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO4P61968 AC131206.1-201ENST00000538078 1211 ntBASIC12.3□□□□□ -0.44
LMO4P61968 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO4P61968 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO4P61968 AC105129.2-201ENST00000559536 390 ntBASIC12.3□□□□□ -0.44
LMO4P61968 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 SNORD3B-2-202ENST00000571722 791 ntBASIC12.3□□□□□ -0.44
LMO4P61968 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO4P61968 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO4P61968 AC097724.1-201ENST00000609581 426 ntBASIC12.3□□□□□ -0.44
LMO4P61968 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO4P61968 AC027601.3-201ENST00000622907 509 ntBASIC12.3□□□□□ -0.44
LMO4P61968 CU633904.3-201ENST00000624042 1029 ntBASIC12.3□□□□□ -0.44
LMO4P61968 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO4P61968 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LMO4P61968 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LMO4P61968 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO4P61968 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 AL008718.2-201ENST00000609206 1313 ntBASIC12.3□□□□□ -0.44
LMO4P61968 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LMO4P61968 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO4P61968 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO4P61968 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO4P61968 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LMO4P61968 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO4P61968 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO4P61968 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO4P61968 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO4P61968 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO4P61968 VDAC1P1-201ENST00000439229 848 ntBASIC12.29□□□□□ -0.44
LMO4P61968 Z97180.1-201ENST00000445173 988 ntBASIC12.29□□□□□ -0.44
LMO4P61968 AL133466.1-201ENST00000447582 150 ntBASIC12.29□□□□□ -0.44
LMO4P61968 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO4P61968 CICP12-201ENST00000455801 843 ntBASIC12.29□□□□□ -0.44
LMO4P61968 RN7SL769P-201ENST00000469386 295 ntBASIC12.29□□□□□ -0.44
LMO4P61968 RN7SL11P-201ENST00000471305 293 ntBASIC12.29□□□□□ -0.44
LMO4P61968 HLA-J-204ENST00000495278 958 ntBASIC12.29□□□□□ -0.44
LMO4P61968 AC125604.1-201ENST00000496255 707 ntBASIC12.29□□□□□ -0.44
LMO4P61968 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.29□□□□□ -0.44
LMO4P61968 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO4P61968 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO4P61968 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO4P61968 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO4P61968 AP000346.4-201ENST00000614827 381 ntBASIC12.29□□□□□ -0.44
LMO4P61968 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO4P61968 AC091812.3-201ENST00000621362 345 ntBASIC12.29□□□□□ -0.44
LMO4P61968 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.29□□□□□ -0.44
LMO4P61968 Z98259.2-201ENST00000641583 609 ntBASIC12.29□□□□□ -0.44
LMO4P61968 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO4P61968 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO4P61968 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO4P61968 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO4P61968 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms