Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.36□□□□□ -0.27
SEC61A1P61619 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SEC61A1P61619 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SEC61A1P61619 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SEC61A1P61619 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC61A1P61619 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC61A1P61619 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC61A1P61619 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 CICP8-201ENST00000455800 2813 ntBASIC13.35□□□□□ -0.27
SEC61A1P61619 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SEC61A1P61619 SPDYE17-201ENST00000412399 783 ntBASIC13.35□□□□□ -0.27
SEC61A1P61619 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC61A1P61619 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.35□□□□□ -0.27
SEC61A1P61619 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.35□□□□□ -0.27
SEC61A1P61619 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.35□□□□□ -0.27
SEC61A1P61619 AC243562.2-201ENST00000561247 970 ntBASIC13.35□□□□□ -0.27
SEC61A1P61619 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.35□□□□□ -0.27
SEC61A1P61619 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.35□□□□□ -0.27
SEC61A1P61619 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.35□□□□□ -0.27
SEC61A1P61619 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.35□□□□□ -0.27
SEC61A1P61619 AL033527.5-202ENST00000641632 1098 ntBASIC13.35□□□□□ -0.27
SEC61A1P61619 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SEC61A1P61619 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 AL122018.1-201ENST00000446607 2310 ntBASIC13.35□□□□□ -0.27
SEC61A1P61619 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SEC61A1P61619 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SEC61A1P61619 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.35□□□□□ -0.27
SEC61A1P61619 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.34□□□□□ -0.27
SEC61A1P61619 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 AC018892.3-201ENST00000623986 2499 ntBASIC13.34□□□□□ -0.27
SEC61A1P61619 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.34□□□□□ -0.27
SEC61A1P61619 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SEC61A1P61619 SPDYE18-201ENST00000510091 1050 ntBASIC13.34□□□□□ -0.27
SEC61A1P61619 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.34□□□□□ -0.27
SEC61A1P61619 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.34□□□□□ -0.27
SEC61A1P61619 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.34□□□□□ -0.27
SEC61A1P61619 AC135586.1-201ENST00000539323 574 ntBASIC13.34□□□□□ -0.27
SEC61A1P61619 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61A1P61619 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms