Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 AL450472.2-201ENST00000603663 1156 ntBASIC14.3□□□□□ -0.12
RPS3AP61247 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.3□□□□□ -0.12
RPS3AP61247 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RPS3AP61247 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RPS3AP61247 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RPS3AP61247 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RPS3AP61247 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RPS3AP61247 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPS3AP61247 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPS3AP61247 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.29□□□□□ -0.12
RPS3AP61247 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RPS3AP61247 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.29□□□□□ -0.12
RPS3AP61247 AC009407.1-201ENST00000568958 598 ntBASIC14.29□□□□□ -0.12
RPS3AP61247 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 AC008738.7-201ENST00000609744 511 ntBASIC14.29□□□□□ -0.12
RPS3AP61247 AL109936.8-201ENST00000641772 604 ntBASIC14.29□□□□□ -0.12
RPS3AP61247 KRT8P44-201ENST00000441609 1350 ntBASIC14.29□□□□□ -0.12
RPS3AP61247 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.29□□□□□ -0.12
RPS3AP61247 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RPS3AP61247 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.29□□□□□ -0.12
RPS3AP61247 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.29□□□□□ -0.12
RPS3AP61247 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.29□□□□□ -0.12
RPS3AP61247 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPS3AP61247 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
RPS3AP61247 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS3AP61247 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS3AP61247 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPS3AP61247 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.28□□□□□ -0.12
RPS3AP61247 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 AZGP1P1-201ENST00000411909 902 ntBASIC14.28□□□□□ -0.12
RPS3AP61247 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.28□□□□□ -0.12
RPS3AP61247 AC114501.2-201ENST00000439631 535 ntBASIC14.28□□□□□ -0.12
RPS3AP61247 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPS3AP61247 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms