Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 AC127383.1-201ENST00000444697 1800 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN6P56747 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CLDN6P56747 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 AL008707.1-201ENST00000422498 534 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 ISCA2P1-201ENST00000425548 448 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 PDIA3P2-201ENST00000428073 158 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 AC073150.1-201ENST00000450406 1084 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.48□□□□□ -0.09
CLDN6P56747 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.48□□□□□ -0.09
CLDN6P56747 AC090164.2-201ENST00000611487 516 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 RN7SL736P-201ENST00000613111 269 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 AL353770.1-201ENST00000614915 403 ntBASIC14.48□□□□□ -0.09
CLDN6P56747 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLDN6P56747 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN6P56747 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN6P56747 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.48□□□□□ -0.09
CLDN6P56747 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLDN6P56747 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLDN6P56747 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.48□□□□□ -0.09
CLDN6P56747 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLDN6P56747 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN6P56747 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.47□□□□□ -0.09
CLDN6P56747 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN6P56747 AL645937.2-201ENST00000396808 931 ntBASIC14.47□□□□□ -0.09
CLDN6P56747 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN6P56747 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN6P56747 RPL18P13-201ENST00000478088 569 ntBASIC14.47□□□□□ -0.09
CLDN6P56747 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN6P56747 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 AC100827.2-201ENST00000563214 1194 ntBASIC14.47□□□□□ -0.09
CLDN6P56747 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
CLDN6P56747 AC100757.4-201ENST00000626934 759 ntBASIC14.47□□□□□ -0.09
CLDN6P56747 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN6P56747 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN6P56747 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms