Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
FOXG1P55316 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 AHCYP2-201ENST00000430630 1300 ntBASIC13.23□□□□□ -0.29
FOXG1P55316 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 AC068587.6-202ENST00000641839 5619 ntBASIC13.23□□□□□ -0.29
FOXG1P55316 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.23□□□□□ -0.29
FOXG1P55316 MESTP3-201ENST00000503460 968 ntBASIC13.23□□□□□ -0.29
FOXG1P55316 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.23□□□□□ -0.29
FOXG1P55316 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 OR10B1P-201ENST00000601666 907 ntBASIC13.23□□□□□ -0.29
FOXG1P55316 AC138466.3-201ENST00000619983 221 ntBASIC13.23□□□□□ -0.29
FOXG1P55316 AC008687.7-202ENST00000637404 953 ntBASIC13.23□□□□□ -0.29
FOXG1P55316 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
FOXG1P55316 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.23□□□□□ -0.29
FOXG1P55316 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FOXG1P55316 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXG1P55316 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXG1P55316 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
FOXG1P55316 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 AC009093.2-202ENST00000620513 2079 ntBASIC13.22□□□□□ -0.29
FOXG1P55316 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 LINC02228-204ENST00000642115 2962 ntBASIC13.22□□□□□ -0.29
FOXG1P55316 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXG1P55316 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
FOXG1P55316 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXG1P55316 FAM8A4P-201ENST00000435433 1213 ntBASIC13.22□□□□□ -0.29
FOXG1P55316 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.22□□□□□ -0.29
FOXG1P55316 AC106820.3-201ENST00000561653 397 ntBASIC13.22□□□□□ -0.29
FOXG1P55316 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 AC009542.2-202ENST00000619004 1067 ntBASIC13.22□□□□□ -0.29
FOXG1P55316 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 AL603764.1-201ENST00000636452 321 ntBASIC13.22□□□□□ -0.29
FOXG1P55316 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 AL033527.4-201ENST00000641026 673 ntBASIC13.22□□□□□ -0.29
FOXG1P55316 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
FOXG1P55316 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
FOXG1P55316 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.22□□□□□ -0.29
FOXG1P55316 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
FOXG1P55316 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms