Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ACE3P-201ENST00000423435 1973 ntBASIC13.21□□□□□ -0.29
ATP1B3P54709 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.21□□□□□ -0.29
ATP1B3P54709 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
ATP1B3P54709 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
ATP1B3P54709 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ATP1B3P54709 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.21□□□□□ -0.29
ATP1B3P54709 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 AC107890.1-201ENST00000422478 521 ntBASIC13.21□□□□□ -0.29
ATP1B3P54709 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.21□□□□□ -0.29
ATP1B3P54709 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.21□□□□□ -0.29
ATP1B3P54709 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
ATP1B3P54709 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.21□□□□□ -0.29
ATP1B3P54709 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.21□□□□□ -0.29
ATP1B3P54709 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATP1B3P54709 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATP1B3P54709 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
ATP1B3P54709 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
ATP1B3P54709 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
ATP1B3P54709 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.21□□□□□ -0.3
ATP1B3P54709 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
ATP1B3P54709 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ATP1B3P54709 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.21□□□□□ -0.3
ATP1B3P54709 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
ATP1B3P54709 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATP1B3P54709 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AC087499.5-201ENST00000452760 1342 ntBASIC13.2□□□□□ -0.3
ATP1B3P54709 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 INTS4P1-203ENST00000641008 3683 ntBASIC13.2□□□□□ -0.3
ATP1B3P54709 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
ATP1B3P54709 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.2□□□□□ -0.3
ATP1B3P54709 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
ATP1B3P54709 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AP000845.1-201ENST00000581677 2131 ntBASIC13.2□□□□□ -0.3
ATP1B3P54709 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms