Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBP50607 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.98■□□□□ 0.15
TUBP50607 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.98■□□□□ 0.15
TUBP50607 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TUBP50607 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TUBP50607 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBP50607 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TUBP50607 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBP50607 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TUBP50607 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TUBP50607 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBP50607 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBP50607 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 GHSR-202ENST00000427970 912 ntBASIC15.97■□□□□ 0.15
TUBP50607 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TUBP50607 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBP50607 CSF2RBP1-201ENST00000447905 391 ntBASIC15.97■□□□□ 0.15
TUBP50607 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBP50607 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TUBP50607 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBP50607 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBP50607 RN7SL48P-201ENST00000579283 293 ntBASIC15.97■□□□□ 0.15
TUBP50607 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBP50607 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBP50607 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBP50607 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBP50607 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 AC148477.4-201ENST00000613430 1793 ntBASIC15.97■□□□□ 0.15
TUBP50607 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 CICP11-201ENST00000434745 2827 ntBASIC15.97■□□□□ 0.15
TUBP50607 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TUBP50607 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBP50607 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TUBP50607 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBP50607 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
TUBP50607 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TUBP50607 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TUBP50607 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
TUBP50607 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 AC006001.1-201ENST00000325130 474 ntBASIC15.96■□□□□ 0.15
TUBP50607 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TUBP50607 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.96■□□□□ 0.15
TUBP50607 CD8B2-202ENST00000417670 633 ntBASIC15.96■□□□□ 0.15
TUBP50607 HLA-V-201ENST00000429037 534 ntBASIC15.96■□□□□ 0.15
TUBP50607 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 BNIP3P42-201ENST00000454982 569 ntBASIC15.96■□□□□ 0.15
TUBP50607 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBP50607 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.96■□□□□ 0.15
TUBP50607 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.96■□□□□ 0.15
TUBP50607 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBP50607 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.96■□□□□ 0.15
TUBP50607 BNIP3P29-201ENST00000598302 571 ntBASIC15.96■□□□□ 0.15
TUBP50607 AC011447.5-201ENST00000616168 564 ntBASIC15.96■□□□□ 0.15
TUBP50607 AC008687.7-202ENST00000637404 953 ntBASIC15.96■□□□□ 0.15
TUBP50607 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBP50607 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms